Time series analysis of collective motions in proteins.

@article{Alakent2004TimeSA,
  title={Time series analysis of collective motions in proteins.},
  author={Burak Alakent and Pemra Doruker and Mehmet C. Camurdan},
  journal={The Journal of chemical physics},
  year={2004},
  volume={120 2},
  pages={1072-88}
}
The dynamics of alpha-amylase inhibitor tendamistat around its native state is investigated using time series analysis of the principal components of the C(alpha) atomic displacements obtained from molecular dynamics trajectories. Collective motion along a principal component is modeled as a homogeneous nonstationary process, which is the result of the… CONTINUE READING