The tomato genome sequence provides insights into fleshy fruit evolution

  title={The tomato genome sequence provides insights into fleshy fruit evolution},
  author={Shusei Sato and Satoshi Tabata and Hideki Hirakawa and Erika Asamizu and Kenta Shirasawa and Sachiko Isobe and Takakazu Kaneko and Yasukazu Nakamura and Daisuke Shibata and Koh Aoki and Michael Egholm and James R. Knight and Robert Bogden and Changbao Li and Yang Shuang and Xun Xu and Shengkai Pan and Shifeng Cheng and Xin Liu and Yuanyuan Ren and Jun Wang and Alessandro Albiero and Francesca Dal Pero and Sara Anna Rita Todesco and Joyce Van Eck and Robert M. Buels and Aureliano Bombarely and Joseph Gosselin and Minyun Huang and Jonathan Leto and Naama Menda and Susan R Strickler and Linyong Mao and Shan Gao and Isaak Y. Tecle and Thomas L. York and Yi Zheng and Julia T Vrebalov and Jemin Lee and Silin Zhong and Lukas A. Mueller and Willem J. Stiekema and Paolo Ribeca and Tyler S Alioto and Wencai Yang and Sanwen Huang and Yongchen Du and Zhonghua Zhang and Jianchang Gao and Yanmei Guo and Xiaoxuan Wang and Ying Li and Jun He and Chuanyou Li and Zhukuan Cheng and Jianru Zuo and Jianfeng Ren and Jiuhai Zhao and Liuhua Yan and Hongling Jiang and Bao Wang and Hongshuang Li and Zhenjun Li and Fuyou Fu and Bingtang Chen and Bin Han and Qi Feng and Danlin Fan and Ying Wang and Hong-Qing Ling and Yongbiao Xue and Doreen Ware and W. Richard McCombie and Zachary B Lippman and Jer-Ming Chia and Ke Y Jiang and Shiran Pasternak and Laura Gelley and Melissa Kramer and Lorinda K. Anderson and Song-Bin Chang and Suzanne M. Royer and Lindsay A. Shearer and Steph{\^e}n M. Stack and Jocelyn K. C. Rose and Yimin Xu and Nancy T. Eannetta and Antonio J Matas and Ryan P McQuinn and Steven D. Tanksley and Francisco Camara and Roderic Guig{\'o} and Stephane Rombauts and Jeffrey A. Fawcett and Yves Van de Peer and Dani Zamir and Chunbo Liang and Manuel Spannagl and Heidrun Gundlach and R{\'e}my Bruggmann and Klaus F. X. Mayer and Zhiqi Jia and Junhong Zhang and Zhibiao Ye and Gerard James Bishop and Sarah Butcher and Rosa M Lopez-Cobollo and Daniel W. A. Buchan and Ioannis Filippis and James Archer Abbott and Rekha Dixit and Manju Vyas Singh and Archana Singh and Jitendra Kumar Pal and Awadhesh Kumar Pandit and Prabhash Kumar Singh and Ajay Kumar Mahato and Vivek Sharma Jeet Dogra and Kishor Gaikwad and Tilak Raj Sharma and Trilochan Mohapatra and Nagendra Kumar Singh and Mathilde Causse and Christophe Rothan and Thomas Schiex and C{\'e}line Noirot and Arnaud Bellec and Christophe Klopp and Corinne Delalande and H{\'e}l{\`e}ne Berg{\`e}s and J. . Y. Mariette and Pierre Frasse and Sonia Vautrin and Mohamed Zouine and Alain Latch{\'e} and Christine Rousseau and Farid Regad and J. Pech and Murielle Philippot and Mondher Bouzayen and Pierre Pericard and Sonia Pasmi{\~n}o de Osorio and Asunci{\'o}n Fern{\'a}ndez del Carmen and Antonio J Monforte and Antonio Granell and Rafael Fern{\'a}ndez-Mu{\~n}oz and Mariana Conte and Gabriel Lichtenstein and Fernando Carrari and Gianluca De Bellis and Fabio Fuligni and Clelia Peano and Silvana Grandillo and Pasquale Termolino and Marco Pietrella and Elio Fantini and Giulia Falcone and Alessia Fiore and Giovanni Giuliano and Loredana Lopez and Paolo Facella and Gaetano Perrotta and Loretta Daddiego and Glenn J Bryan and Modesto Orozco and Xavier Pastor and David Torrents and Keygene N. V. Marco G. M. van Schriek and Richard M. C. Feron and Jan van Oeveren and Peter de Heer and Lorena daPonte and Saskia Jacobs-Oomen and Mike Cariaso and M Matthijs Prins and Michiel JT van Eijk and Antoine Janssen and Mark J.J. van Haaren and Sung-Hwan Jo and Jungeun Kim and Suk-Yoon Kwon and Sangmi Kim and Dal-Hoe Koo and Sanghyeob Lee and Cheol-Goo Hur and Christopher R. Clouser and Alain Rico and Asis Hallab and Christiane Gebhardt and Kathrin Klee and Anika J{\"o}cker and Jens Warfsmann and Ulrike Goebel and Shingo Kawamura and Kentaro Yano and Jamie D. Sherman and Hiroyuki Fukuoka and Satomi Negoro and Sarita Bhutty and Parul Chowdhury and Debasis Chattopadhyay and Erwin Datema and Sandra Smit and Eliog. W. M. Schijlen and Jos{\'e} van de Belt and Jan C. van Haarst and Sander A. Peters and Marjo J. van Staveren and Marleen H.C. Henkens and P J W Mooyman and T. M. R. Hesselink and Roeland C. H. J. van Ham and Guoyong Jiang and Marcus Droege and Doil Choi and Byung-Cheol Kang and Byung-Dong Kim and Minkyu Park and Seungill Kim and Seon-In Yeom and Yong-Hwan Lee and Yang Do Choi and Guangcun Li and Jianwei Gao and Yongsheng Liu and Shengxiong Huang and Victoria Fern{\'a}ndez-Pedrosa and Carmen Gonz{\'a}lez Collado and Sheila Z{\'u}{\~n}iga and Guoping Wang and Rebecca M. Cade and Robert A. Dietrich and Jane Rogers and Sandra Knapp and Zhangjun Fei and Ruth A. White and Theodore W. Thannhauser and James J. Giovannoni and Miguel A Botella and Louise H. Gilbert and Ramon Gonzalez and Jose Luis Goicoechea and Yeisoo Yu and David A Kudrna and Kristi Collura and Marina Wissotski and Rod A. Wing and Heiko Schoof and Blake C. Meyers and Aishwarya Bala Gurazada and Pamela J. Green and Saloni Mathur and Shailendra K. Vyas and Amolkumar U. Solanke and Rahul Kumar and Vikrant Gupta and Arun Kumar Sharma and Paramjit Khurana and Jitendra P Khurana and Akhilesh K. Tyagi and Tam{\'a}s Dalmay and Irina Mohorianu and Brandon Walts and Srikar Chamala and William Brad Barbazuk and Jingping Li and Hui Guo and Tae-Ho Lee and Yupeng Wang and Dong Zhang and Andrew H. Paterson and Xiyin Wang and Haibao Tang and Amalia Barone and Maria Luisa Chiusano and Maria Raffaella Ercolano and Nunzio D'Agostino and Miriam Di Filippo and Alessandra Traini and Walter Sanseverino and Luigi Frusciante and Graham B Seymour and Mounir Elharam and Ying Fu and Axin Hua and Steven Kenton and Jennifer Lewis and Shaoping Lin and Fares Z. Najar and Hongshing Lai and Baifang Qin and Chunmei Qu and Ruihua Shi and Douglas K. White and Jim F. White and Yanbo Xing and Keqin Yang and Jing Yi and Ziyun Yao and Liping Zhou and B. A. Roe and Alessandro Vezzi and Michela D'angelo and Rosanna Zimbello and Riccardo Schiavon and Elisa Caniato and Chiara Rigobello and Davide Campagna and Nicola Vitulo and Giorgio Rossi Valle and David R Nelson and Emanuele De Paoli and D{\'o}ra Szinay and Hans H. de Jong and Yuling Bai and Richard G. F. Visser and Rene Klein Lankhorst and Helen L. Beasley and Karen McLaren and Christine Nicholson and C. Wagner Riddle and Giulio Gianese},
Tomato (Solanum lycopersicum) is a major crop plant and a model system for fruit development. Solanum is one of the largest angiosperm genera and includes annual and perennial plants from diverse habitats. Here we present a high-quality genome sequence of domesticated tomato, a draft sequence of its closest wild relative, Solanum pimpinellifolium, and compare them to each other and to the potato genome (Solanum tuberosum). The two tomato genomes show only 0.6% nucleotide divergence and signs of… CONTINUE READING


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