The University of Minnesota Pathway Prediction System: multi-level prediction and visualization

@inproceedings{Gao2011TheUO,
  title={The University of Minnesota Pathway Prediction System: multi-level prediction and visualization},
  author={Junfeng Gao and Lynda B. M. Ellis and Lawrence P. Wackett},
  booktitle={Nucleic Acids Research},
  year={2011}
}
The University of Minnesota Pathway Prediction System (UM-PPS, http://umbbd.msi.umn.edu/predict/) is a rule-based system that predicts microbial catabolism of organic compounds. Currently, its knowledge base contains 250 biotransformation rules and five types of metabolic logic entities. The original UM-PPS predicted up to two prediction levels at a time. Users had to choose a predicted product to continue the prediction. This approach provided a limited view of prediction results and heavily… CONTINUE READING