The RNA Newton polytope and learnability of energy parameters

  title={The RNA Newton polytope and learnability of energy parameters},
  author={Elmirasadat Forouzmand and Hamidreza Chitsaz},
MOTIVATION Computational RNA structure prediction is a mature important problem that has received a new wave of attention with the discovery of regulatory non-coding RNAs and the advent of high-throughput transcriptome sequencing. Despite nearly two score years of research on RNA secondary structure and RNA-RNA interaction prediction, the accuracy of the state-of-the-art algorithms are still far from satisfactory. So far, researchers have proposed increasingly complex energy models and improved… CONTINUE READING
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Cenk Sahinalp . biRNA : Fast RNARNA binding sites prediction

  • Hamidreza Chitsaz, Rolf Backofen, S.
  • Workshop on Algorithms in Bioinformatics ( WABI…
  • 2009
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