The RAxML v 8 . 1 . X Manual by Alexandros Stamatakis

@inproceedings{Stamatakis2014TheRV,
  title={The RAxML v 8 . 1 . X Manual by Alexandros Stamatakis},
  author={Alexandros Stamatakis},
  year={2014}
}
RAxML (Randomized Axelerated Maximum Likelihood) is a program for sequential and parallel Maximum Likelihood based inference of large phylogenetic trees. It can also be used for postanalyses of sets of phylogenetic trees, analyses of alignments and, evolutionary placement of short reads. It has originally been derived from fastDNAml which in turn was derived from Joe Felsentein’s dnaml which is part of the PHYLIP package. 

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