The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes.

@article{Ruepp2004TheFA,
  title={The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes.},
  author={Andreas Ruepp and Alfred Zollner and Dieter Maier and Kaj Albermann and Jean Hani and Martin Mokrejs and Igor V. Tetko and Ulrich G{\"u}ldener and Gertrud Mannhaupt and Martin M{\"u}nsterk{\"o}tter and Hans Werner Mewes},
  journal={Nucleic acids research},
  year={2004},
  volume={32 18},
  pages={5539-45}
}
In this paper, we present the Functional Catalogue (FunCat), a hierarchically structured, organism-independent, flexible and scalable controlled classification system enabling the functional description of proteins from any organism. FunCat has been applied for the manual annotation of prokaryotes, fungi, plants and animals. We describe how FunCat is implemented as a highly efficient and robust tool for the manual and automatic annotation of genomic sequences. Owing to its hierarchical… CONTINUE READING
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