The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence.

@article{Fizames2004TheAR,
  title={The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence.},
  author={C{\'e}cile Fizames and St{\'e}phane Mu{\~n}os and C{\'e}line Cazettes and Philippe Nacry and Jossia Boucherez and Fr{\'e}d{\'e}ric Gaymard and David Piquemal and Val{\'e}rie Delorme and Th{\'e}r{\`e}se Commes and Patrick Doumas and Richard Cooke and Jacques Marti and Herv{\'e} Sentenac and Alain Gojon},
  journal={Plant physiology},
  year={2004},
  volume={134 1},
  pages={
          67-80
        }
}
Large-scale identification of genes expressed in roots of the model plant Arabidopsis was performed by serial analysis of gene expression (SAGE), on a total of 144,083 sequenced tags, representing at least 15,964 different mRNAs. For tag to gene assignment, we developed a computational approach based on 26,620 genes annotated from the complete sequence of the genome. The procedure selected warrants the identification of the genes corresponding to the majority of the tags found experimentally… CONTINUE READING

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