SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks

Abstract

UNLABELLED SpotXplore is a plugin for Cytoscape for extraction and visualization of differentially expressed subnetworks (hotspots) from gene networks. The hotspot-based visualization approach enables interactive exploration of regulatory interactions in differentially expressed gene sets, and it allows a researcher to explore gene expression in direct… (More)
DOI: 10.1093/bioinformatics/btq535

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Cite this paper

@inproceedings{Westenberg2010SpotXploreAC, title={SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks}, author={Michel A. Westenberg and Jos B. T. M. Roerdink and Oscar P. Kuipers and Sacha A. F. T. van Hijum}, booktitle={Bioinformatics}, year={2010} }