Sphingobacterium daejeonense sp. nov., isolated from a compost sample.

@article{Kim2006SphingobacteriumDS,
  title={Sphingobacterium daejeonense sp. nov., isolated from a compost sample.},
  author={Kyoung-Ho Kim and Leonid N. Ten and Qingmei Liu and Wan-Taek Im and sung-taik lee},
  journal={International journal of systematic and evolutionary microbiology},
  year={2006},
  volume={56 Pt 9},
  pages={
          2031-6
        }
}
A Gram-negative, strictly aerobic, rod-shaped, non-motile, non-spore-forming bacterial strain, designated TR6-04(T), was isolated from compost and characterized taxonomically by using a polyphasic approach. The organism grew optimally at 30 degrees Celsius and at pH 6.5-7.0. The isolate was positive for catalase and oxidase tests but negative for gelatinase, indole and H(2)S production. Comparative 16S rRNA gene sequence analysis showed that strain TR6-04(T) fell within the radiation of the… 
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References

SHOWING 1-10 OF 34 REFERENCES
Sphingopyxis granuli sp. nov., a beta-glucosidase-producing bacterium in the family Sphingomonadaceae in alpha-4 subclass of the Proteobacteria.
TLDR
DNA-DNA hybridization and physiological and biochemical tests clearly demonstrated that strain Kw07T represents a distinct species and should be classified as the type strain for a novel Sphingopyxis species, for which the name Sphingopexis granuli sp.
Sphingobacterium antarcticus sp. nov., a Psychrotrophic Bacterium from the Soils of Schirmacher Oasis, Antarctica
TLDR
Two pure cultures of bacteria isolated from soil samples collected in Schirmacher Oasis, Antarctica, conformed to the definition of the genus Sphingobacterium, and were found to be psychrotrophic and 7% homology with S. multivorum and S. spiritivorum.
Proposals of Sphingobacterium faecium sp. nov., Sphingobacterium piscium sp. nov., Sphingobacterium heparinum comb. nov., sphingobacterium thalpophilum comb. nov. and two genospecies of the genus Sphingobacterium, and synonymy of Flavobacterium yabuuchiae and Sphingobacterium spiritivorum.
TLDR
Two new species and two new combinations are proposed based on their chemotaxonomic and physiological characteristics together with DNA/DNA hybridization studies, and Flavobacterium yabuuchiae was found to be a synonym of Sphingobacteria spiritivorum.
Flavobacterium multivorum, a New Species Isolated from Human Clinical Specimens and Previously Known as Group IIk, Biotype 2
TLDR
A new species, with the name Flavobacterium multivorum, is proposed for these 28 strains, which could not be assigned to any previously defined species because of their ability to produce acid from a range of carbohydrates and their resistance to antimicrobial agents.
Flavobacterium spiritivorum, a New Species Isolated from Human Clinical Specimens
TLDR
A distinguishing feature of the new species is its ability to produce acid from various carbohydrates and alcohols, which distinguishes them from all other Flavobacterium species.
Gram-Negative Mesophilic Sulfate-Reducing Bacteria
TLDR
The utilization of polysaccharides or polypeptides, such as has been observed with the extremely thermophilic sulfate-reducing archaebacterium Archaeoglobus (Stetter, 1988; Stetter et al., 1987), has not been reported for mesophobic sulfate reducers.
Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb. nov., Sphingobacterium multivorum comb. nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: Glucose-Nonfermenting Gram-Negative Rods in CDC Groups IIK-2 and IIb
TLDR
A new genus, Sphingobacterium, two new combinations, and two new species are described, including S. spiritivorum and S. multivorum, which are characterized and distinguished from the genus Flavobacteria by the presence in its strains of high concentrations of sphingophospholipids as cellular lipid components.
A Taxonomic Study of Flavobacterium spiritivorum and Sphingobacterium mizutae: Proposal of Flavobacterium yabuuchiae sp. nov. and Flavobacterium mizutaii comb. nov.
TLDR
A new species is proposed, with the name Flavobacterium yabuuchiae, with strain F8081 (= NCTC 12113) as the type strain, which represents a separate species 32% related to S. mizutae but also represents a closely related, but separate, species.
Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov.
TLDR
It was shown that isolates of two of these clusters and S. heparinum species belong to a new genus for which the name Pedobacter is proposed, which consists of Pedobacteria heparinus comb.
Studies on dissimilatory sulfate-reducing bacteria that decompose fatty acids
TLDR
Gliding motility, ultrastructure and nutrition of two newly isolated filamentous sulfate-reducing bacteria, strains 5ac10 and 4be13, were investigated; the capacity of complete oxidation was shown by stoichiometric measurements with acetate plus sulfate.
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