Software Suite for Gene and Protein Annotation Prediction and Similarity Search

  title={Software Suite for Gene and Protein Annotation Prediction and Similarity Search},
  author={Davide Chicco and Marco Masseroli},
  journal={IEEE/ACM Transactions on Computational Biology and Bioinformatics},
  • D. Chicco, M. Masseroli
  • Published 1 July 2015
  • Computer Science, Biology
  • IEEE/ACM Transactions on Computational Biology and Bioinformatics
In the computational biology community, machine learning algorithms are key instruments for many applications, including the prediction of gene-functions based upon the available biomolecular annotations. Additionally, they may also be employed to compute similarity between genes or proteins. Here, we describe and discuss a software suite we developed to implement and make publicly available some of such prediction methods and a computational technique based upon Latent Semantic Indexing (LSI… 

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