ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

@inproceedings{Morgan2009ShortReadAB,
  title={ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data},
  author={Martin Morgan and Simon Anders and Michael F. Lawrence and Patrick Aboyoun and Herv{\'e} Pag{\`e}s and Robert Gentleman},
  booktitle={Bioinformatics},
  year={2009}
}
UNLABELLED ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources. AVAILABILITY AND IMPLEMENTATION This package is implemented in R and available at the Bioconductor web site; the package contains a 'vignette… CONTINUE READING
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