Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria


In this paper, we have developed tools to analyze prokaryotic cells growing in monolayers in a microfluidic device. Individual bacterial cells are identified using a novel curvature based approach and tracked over time for several generations. The resulting tracks are thereafter assessed and filtered based on track quality for subsequent analysis of… (More)
DOI: 10.1109/JSTSP.2015.2491304


18 Figures and Tables

Cite this paper

@article{Sadanandan2016SegmentationAT, title={Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria}, author={Sajith Kecheril Sadanandan and Ozden Baltekin and Klas E. G. Magnusson and Alexis Boucharin and Petter Ranefall and Joakim Jald{\'e}n and Johan Elf and Carolina W{\"a}hlby}, journal={IEEE Journal of Selected Topics in Signal Processing}, year={2016}, volume={10}, pages={174-184} }