SNPfisher: tools for probing genetic variation in laboratory-reared zebrafish

  title={SNPfisher: tools for probing genetic variation in laboratory-reared zebrafish},
  author={Matthew G. Butler and James R Iben and Kurt C. Marsden and Jonathan A. Epstein and Michael Granato and Brant M. Weinstein},
  pages={1542 - 1552}
Single nucleotide polymorphisms (SNPs) are the benchmark molecular markers for modern genomics. Until recently, relatively few SNPs were known in the zebrafish genome. The use of next-generation sequencing for the positional cloning of zebrafish mutations has increased the number of known SNP positions dramatically. Still, the identified SNP variants remain under-utilized, owing to scant annotation of strain specificity and allele frequency. To address these limitations, we surveyed SNP… 

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