SNP detection for massively parallel whole-genome resequencing.

  title={SNP detection for massively parallel whole-genome resequencing.},
  author={Ruiqiang Li and Yingrui Li and Xiaodong Fang and Huanming Yang and Jian Wang and Karsten Kristiansen and Jun Wang},
  journal={Genome research},
  volume={19 6},
Next-generation massively parallel sequencing technologies provide ultrahigh throughput at two orders of magnitude lower unit cost than capillary Sanger sequencing technology. One of the key applications of next-generation sequencing is studying genetic variation between individuals using whole-genome or target region resequencing. Here, we have developed a consensus-calling and SNP-detection method for sequencing-by-synthesis Illumina Genome Analyzer technology. We designed this method by… CONTINUE READING
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