Representation and Simulation of Biochemical Processes Using the pi-Calculus Process Algebra

@article{Regev2001RepresentationAS,
  title={Representation and Simulation of Biochemical Processes Using the pi-Calculus Process Algebra},
  author={Aviv Regev and William Silverman and Ehud Y. Shapiro},
  journal={Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing},
  year={2001},
  pages={459-70}
}
Despite the rapidly accumulating body of knowledge about protein networks, there is currently no convenient way of sharing and manipulation of such information. We suggest that a formal computer language for describing the biomolecular processes underlying protein networks is essential for rapid advancement in this field. We propose to model biomolecular processes by using the pi-Calculus, a process algebra, originally developed for describing computer processes. Our model for biochemical… CONTINUE READING
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