Rejection-free kinetic Monte Carlo simulation of multivalent biomolecular interactions

@inproceedings{Yang2008RejectionfreeKM,
  title={Rejection-free kinetic Monte Carlo simulation of multivalent biomolecular interactions},
  author={Jin Yang and William S. Hlavacek},
  year={2008}
}
The system-level dynamics of multivalent biomolecular interactions can be simulated using a rule-based kinetic Monte Carlo method in which a rejection sampling strategy is used to generate reaction events. This method becomes inefficient when simulating aggregation processes with large biomolecular complexes. Here, we present a rejectionfree method for… CONTINUE READING