ReaDDy - A Software for Particle-Based Reaction-Diffusion Dynamics in Crowded Cellular Environments

@inproceedings{Schneberg2013ReaDDyA,
  title={ReaDDy - A Software for Particle-Based Reaction-Diffusion Dynamics in Crowded Cellular Environments},
  author={Johannes Sch{\"o}neberg and Frank No{\'e}},
  booktitle={PloS one},
  year={2013}
}
We introduce the software package ReaDDy for simulation of detailed spatiotemporal mechanisms of dynamical processes in the cell, based on reaction-diffusion dynamics with particle resolution. In contrast to other particle-based reaction kinetics programs, ReaDDy supports particle interaction potentials. This permits effects such as space exclusion… CONTINUE READING