RNAMotif, an RNA secondary structure definition and search algorithm.

@article{Macke2001RNAMotifAR,
  title={RNAMotif, an RNA secondary structure definition and search algorithm.},
  author={Thomas J. Macke and David J. Ecker and Robin Ray Gutell and Daniel Gautheret and David A. Case and Rangarajan Sampath},
  journal={Nucleic acids research},
  year={2001},
  volume={29 22},
  pages={4724-35}
}
RNA molecules fold into characteristic secondary and tertiary structures that account for their diverse functional activities. Many of these RNA structures are assembled from a collection of RNA structural motifs. These basic building blocks are used repeatedly, and in various combinations, to form different RNA types and define their unique structural and functional properties. Identification of recurring RNA structural motifs will therefore enhance our understanding of RNA structure and help… CONTINUE READING
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