RNA-Pareto: interactive analysis of Pareto-optimal RNA sequence-structure alignments


Incorporating secondary structure information into the alignment process improves the quality of RNA sequence alignments. Instead of using fixed weighting parameters, sequence and structure components can be treated as different objectives and optimized simultaneously. The result is not a single, but a Pareto-set of equally optimal solutions, which all… (More)
DOI: 10.1093/bioinformatics/btt536


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