Protofold II: Enhanced Model and Implementation for Kinetostatic Protein Folding

@article{Tavousi2017ProtofoldIE,
  title={Protofold II: Enhanced Model and Implementation for Kinetostatic Protein Folding},
  author={Pouya Tavousi and Morad Behandish and Horea T. Ilies and Kazem Kazerounian},
  journal={ArXiv},
  year={2017},
  volume={abs/1712.05012}
}
A reliable prediction of 3D protein structures from sequence data remains a big challenge due to both theoretical and computational difficulties. We have previously shown that our kinetostatic compliance method (KCM) implemented into the Protofold package can overcome some of the key difficulties faced by other de novo structure prediction methods, such as the very small time steps required by the molecular dynamics (MD) approaches or the very large number of samples needed by the Monte Carlo… 
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