Prediction of contact maps by GIOHMMs and recurrent neural networks using lateral propagation from all four cardinal corners

@article{Pollastri2002PredictionOC,
  title={Prediction of contact maps by GIOHMMs and recurrent neural networks using lateral propagation from all four cardinal corners},
  author={Gianluca Pollastri and Pierre Baldi},
  journal={Bioinformatics},
  year={2002},
  volume={18 Suppl 1},
  pages={S62-70}
}
MOTIVATION Accurate prediction of protein contact maps is an important step in computational structural proteomics. Because contact maps provide a translation and rotation invariant topological representation of a protein, they can be used as a fundamental intermediary step in protein structure prediction. RESULTS We develop a new set of flexible machine learning architectures for the prediction of contact maps, as well as other information processing and pattern recognition tasks. The… CONTINUE READING

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