Peptide sequence confidence in accurate mass and time analysis and its use in complex proteomics experiments.


We present new algorithms and a software implementation for assigning confidence to peptide sequence assignments obtained through classic accurate mass and retention time (AMT) matching techniques, as well as methods for integrating these assignments with standard proteomics workflows. The algorithms are intended to increase the number of peptides and… (More)
DOI: 10.1021/pr8004502

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