Pash 2.0: Scaleable Sequence Anchoring for Next-Generation Sequencing Technologgies

Abstract

Many applications of next-generation sequencing technologies involve anchoring of a sequence fragment or a tag onto a corresponding position on a reference genome assembly. Positional Hashing method, implemented in the Pash 2.0 program, is specifically designed for the task of high-volume anchoring. In this article we present multi-diagonal gapped kmer… (More)

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