Parasphingopyxis lamellibrachiae gen. nov., sp. nov., isolated from a marine annelid worm.

@article{Uchida2012ParasphingopyxisLG,
  title={Parasphingopyxis lamellibrachiae gen. nov., sp. nov., isolated from a marine annelid worm.},
  author={Hiromi Uchida and Koei Hamana and Masayuki Miyazaki and Takao Yoshida and Yuichi Nogi},
  journal={International journal of systematic and evolutionary microbiology},
  year={2012},
  volume={62 Pt 9},
  pages={
          2224-8
        }
}
  • H. UchidaK. Hamana Y. Nogi
  • Published 1 September 2012
  • Biology
  • International journal of systematic and evolutionary microbiology
A Gram-stain-negative, aerobic, motile, orange-pigmented, slightly halophilic, rod-shaped bacterium, designated strain JAMH 0132(T), was isolated from the trophosome of a tubeworm in Kagoshima Bay, Japan, and its taxonomic position was investigated using a polyphasic approach. The novel strain grew optimally at 28-30 °C and with about 2.0 % (w/v) NaCl. Chemotaxonomic analysis showed that Q-10 was the predominant respiratory quinone and that C(18 : 1)ω7c, C(16 : 0) 2-OH and C(16 : 0) were the… 

Figures from this paper

Parasphingopyxis algicola sp. nov., isolated from a marine red alga Asparagopsis taxiformis and emended description of the genus Parasphingopyxis Uchida et al. 2012.

Based on phenotypic, chemotaxonomic and molecular features, strain ATAX6-5T clearly represents a novel species of the genus Parasphingopyxis, for which the name Paraspheyxis algicola sp.

Planktotalealamellibrachiae sp. nov., isolated from a marine organism in Kagoshima Bay, Japan.

A novel marine bacterial strain was isolated from a tubeworm trophosome in Kagoshima Bay, Japan, and represents a novel species of the genus Planktotalea, for which the name PlankTotalealamellibrachiae sp.

Hephaestia caeni gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from activated sludge.

A Gram-staining-negative, rod-shaped and motile bacterium, designated strain ERB1-3(T), was isolated from a laboratory-scale activated sludge system treating coke plant effluent using thiocyanate-supplemented growth medium and is considered to represent a novel genus and species.

Parasphingopyxis marina sp. nov. isolated from coastal seawater.

A Gram-stain-negative, aerobic, yellow-pigmented and non-motile rod-shaped bacterium, isolated from coastal seawater collected from the East Sea, Republic of Korea, represents a novel species of the genus Parasphingopyxis, for which the name Paraspherpyxis marina sp.

Povalibacter uvarum gen. nov., sp. nov., a polyvinyl-alcohol-degrading bacterium isolated from grapes.

It is proposed that strain Zumi 37(T), a Gram-stain-negative, rod-shaped, motile, non-spore-forming and strictly aerobic chemo-organotroph, represents a novel species in a new genus, Povalibacter uvarum gen. nov., sp.

Thalassobius abyssi sp. nov., a marine bacterium isolated from cold-seep sediment.

Based on differences in taxonomic characteristics, the isolated strain represents a novel species of the genus Thalassobius, for which the name ThalASSobius abyssi sp.

Sphingomicrobium astaxanthinifaciens sp. nov., an astaxanthin-producing glycolipid-rich bacterium isolated from surface seawater and emended description of the genus Sphingomicrobium.

Chemotaxonomic evidence including characteristic glycolipid profile, presence of significant amounts of C(18:1) 2-OH and absence of typical hydroxylated fatty acids and several other phenotypic features support the classification of strain CC-AMO-30B(T) as a representative of a novel species within the genus Sphingomicrobium.

Shimia sagamensis sp. nov., a marine bacterium isolated from cold-seep sediment.

Based on differences in taxonomic characteristics, the isolated strain represents a novel species of the genus Shimia, for which the name Shimia sagamensis sp.

Sphingomonas faucium sp. nov., isolated from canyon soil.

The genotypic, chemotaxonomic and phenotypic data revealed that the isolate represents a novel species of the genus Sphingomonas, for which the name Spindingomonas faucium sp.

Thalassospira povalilytica sp. nov., a polyvinyl-alcohol-degrading marine bacterium.

A polyvinyl-alcohol-degrading marine bacterium was isolated from plastic rope litter found in Tokyo Bay, Japan and represents a novel species of the genus Thalassospira for which the name ThalASSospira povalilytica sp.

References

SHOWING 1-10 OF 29 REFERENCES

Sphingopyxis flavimaris sp. nov., isolated from sea water of the Yellow Sea in Korea.

  • J. YoonT. Oh
  • Biology
    International journal of systematic and evolutionary microbiology
  • 2005
Strain SW-151T (=KCTC 12232T=DSM 16223T) should be classified as a novel Sphingopyxis species, for which the name Sphingopicxis flavimaris sp.

Sphingosinicella microcystinivorans gen. nov., sp. nov., a microcystin-degrading bacterium.

Three strains of bacteria that degrade the cyanobacterial hepatotoxin microcystin, Y2T, MDB2 and MDB3, were isolated from a eutrophic lake, Lake Suwa, and the Tenryu River, Japan, and characterized, and it is proposed that they represent a new genus and species of the family Sphingomonadaceae.

Sphingopyxis witflariensis sp. nov., isolated from activated sludge.

Based upon results obtained by detailed physiological/biochemical testing and previously published molecular evidence, strain W-50(T) was clearly distinguishable from all other Sphingopyxis species, and the creation of a novel species, Sphingopexis witflariensis sp.

Sphingomonas aurantiaca sp. nov., Sphingomonas aerolata sp. nov. and Sphingomonas faeni sp. nov., air- and dustborne and Antarctic, orange-pigmented, psychrotolerant bacteria, and emended description of the genus Sphingomonas.

Results from DNA-DNA hybridizations and comparison of protein patterns indicated that the seven strains are members of three distinct species, and three novel species of the genus Sphingomonas are proposed.

Sphingopyxis marina sp. nov. and Sphingopyxis litoris sp. nov., isolated from seawater.

Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two isolates belong to the genus Sphingopyxis, showing the highest level of sequence similarity with respect to Sphingopexis flavimaris SW-151(T) (97.9 %).

Novosphingobium tardaugens sp. nov., an oestradiol-degrading bacterium isolated from activated sludge of a sewage treatment plant in Tokyo.

Analysis of its 16S rDNA sequence, DNA base composition, whole-cell fatty acid profile and isoprenoid quinone composition, as well as the presence of sphingoglycolipid, revealed that the isolate is a member of the genus Novosphingobium.

Sphingobium amiense sp. nov., a novel nonylphenol-degrading bacterium isolated from a river sediment.

It is proposed that strain YT(T) (=IAM 15006 (T)=JCM 11777(T)=CIP 107839(T)) represents a novel species of the genus Sphingobium, SphingOBium amiense sp.

Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment.

Nine agar-degrading strains isolated from deep-sea sediment in Suruga Bay and Sagami Bay and off Kagoshima, Japan were found to be closely affiliated with members of the genera Microbulbifer and Thalassomonas.

Shewanella surugensis sp. nov., Shewanella kaireitica sp. nov. and Shewanella abyssi sp. nov., isolated from deep-sea sediments of Suruga Bay, Japan.

Six strains representing three novel species were isolated from deep-sea sediment in Suruga Bay, Japan, at a depth of 2406-2409 m on the basis of 16S rRNA gene sequence analysis, and are closely affiliated with members of the genus Shewanella.

Emendation of the genus Sphingomonas Yabuuchi et al. 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola.

None of the physiological and biochemical characteristics considered, including cellular lipids and fatty acid composition, provided evidence for the division of the current genus Sphingomonas, and it is concluded that the genus should remain undivided at this time.