Parallel and Memory-Efficient Preprocessing for Metagenome Assembly


The analysis of high-throughput metagenomic sequencingdata poses significant computational challenges. Mostcurrent de novo assembly tools use the de Bruijn graph-basedmethodology. In prior work, a connected components decompositionof the de Bruijn graph and subsequent partitioningof sequence read data was shown to be an effective memory… (More)
DOI: 10.1109/IPDPSW.2017.159


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