Parallel PPI Prediction Performance Study on HPC Platforms

  title={Parallel PPI Prediction Performance Study on HPC Platforms},
  author={A. El-Moursy and Wael S. Afifi and F. Sibai and S. M. Nassar},
  journal={J. Circuits Syst. Comput.},
  • A. El-Moursy, Wael S. Afifi, +1 author S. M. Nassar
  • Published 2015
  • Computer Science
  • J. Circuits Syst. Comput.
  • STRIKE is an algorithm which predicts protein–protein interactions (PPIs) and determines that proteins interact if they contain similar substrings of amino acids. Unlike other methods for PPI prediction, STRIKE is able to achieve reasonable improvement over the existing PPI prediction methods. Although its high accuracy as a PPI prediction method, STRIKE consumes a large execution time and hence it is considered to be a compute-intensive application. In this paper, we develop and implement a… CONTINUE READING
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