PREDDIMER: a web server for prediction of transmembrane helical dimers

  title={PREDDIMER: a web server for prediction of transmembrane helical dimers},
  author={Anton A. Polyansky and Anton O. Chugunov and Pavel E. Volynsky and Nikolay A. Krylov and Dmitry E. Nolde and Roman G. Efremov},
  volume={30 6},
SUMMARY Here we present PREDDIMER, a web tool for prediction of dimer structure of transmembrane (TM) helices. PREDDIMER allows (i) reconstruction of a number of dimer structures for given sequence(s) of TM protein fragments, (ii) ranking and filtering of predicted structures according to respective values of a scoring function, (iii) visualization of predicted 3D dimer structures and (iv) visualization of surface hydrophobicity of TM helices and their contacting (interface) regions represented… CONTINUE READING
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