PPRODO: prediction of protein domain boundaries using neural networks.

  title={PPRODO: prediction of protein domain boundaries using neural networks.},
  author={Jaehyun Sim and Seung-Yeon Kim and Jooyoung Lee},
  volume={59 3},
Successful prediction of protein domain boundaries provides valuable information not only for the computational structure prediction of multidomain proteins but also for the experimental structure determination. Since protein sequences of multiple domains may contain much information regarding evolutionary processes such as gene-exon shuffling, this information can be detected by analyzing the position-specific scoring matrix (PSSM) generated by PSI-BLAST. We have presented a method, PPRODO… CONTINUE READING
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