Optimizing Property Codes in Protein Data Reveals Structural Characteristics

Abstract

We search for assignments of numbers to the amino acids (property codes) that maximize the autocorrelation function signal in given protein sequence data by an iterative method. Our method yields similar results to optimization with the related extended Jacobi method for joint diagonalization and standard optimization tools. In nonhomologous sets… (More)
DOI: 10.1007/3-540-44989-2_30

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Cite this paper

@inproceedings{Weiss2003OptimizingPC, title={Optimizing Property Codes in Protein Data Reveals Structural Characteristics}, author={Olaf Weiss and Andreas Ziehe and Hanspeter Herzel}, booktitle={ICANN}, year={2003} }