OntoGene in BioCreative II.5

  title={OntoGene in BioCreative II.5},
  author={Franca Rinaldi and Gerold Schneider and Kuldar Kaljurand and Simon Clematide and T Vachon and Martin Romacker},
  journal={IEEE/ACM Transactions on Computational Biology and Bioinformatics},
We describe a system for the detection of mentions of protein-protein interactions in the biomedical scientific literature. The original system was developed as a part of the OntoGene project, which focuses on using advanced computational linguistic techniques for text mining applications in the biomedical domain. In this paper, we focus in particular on the participation to the BioCreative II.5 challenge, where the OntoGene system achieved best-ranked results. Additionally, we describe a… CONTINUE READING
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