One hundred and seventeen clades of euagarics.

@article{Moncalvo2002OneHA,
  title={One hundred and seventeen clades of euagarics.},
  author={J. Moncalvo and R. Vilgalys and S. Redhead and James E. Johnson and T. James and M. Catherine Aime and V. Hofstetter and Sebastiaan J. W. Verduin and E. Larsson and T. Baroni and R. Greg Thorn and S. Jacobsson and H. Cl{\'e}mençon and O. K. Miller},
  journal={Molecular phylogenetics and evolution},
  year={2002},
  volume={23 3},
  pages={
          357-400
        }
}
This study provides a first broad systematic treatment of the euagarics as they have recently emerged in phylogenetic systematics. [...] Key Method 700 species) of the known number of species of gilled mushrooms that were traditionally classified in the order Agaricales. About 1000 nucleotide sequences at the 5(') end of the nuclear large ribosomal subunit gene (nLSU) were produced for each taxon. Phylogenetic analyses of nucleotide sequence data employed unequally weighted parsimony and bootstrap methods…Expand
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References

SHOWING 1-10 OF 163 REFERENCES
Higher-level phylogenetic relationships of Homobasidiomycetes (mushroom-forming fungi) inferred from four rDNA regions.
TLDR
Parsimony and maximum-likelihood analyses support the monophyly of the eight major clades recognized by Hibbett and Thorn, and most groups are strongly supported in bootstrapped parsimony analyses, but the polyporoid clade remains weakly supported. Expand
Eumycetozoans and molecular systematics
TLDR
A review of morphological evidence supporting some aspects of this hypothesis is presented along with explicit explanations of the shortcomings of Morphological data as tests of other aspects. Expand
Phylogenetic relationships in Auriculariales and related groups: hypotheses derived from nuclear ribosomal DNA sequences
TLDR
The Sebacinaceae, including the genera Sebacina, Efibulobasidium, Tremelloscypha, and Craterocolla, was confirmed as a monophyletic group, which appeared distant from other taxa ascribed to the Auriculariales. Expand
Phylogenetic Relationships of Lentinus (Basidiomycotina) Inferred from Molecular and Morphological Characters
TLDR
Phylogenetic relationships of the basidiomycete Lentinus were investigated using 20 morphological and 133 nucleic acid sequence characters from three regions in the 5' half of the nuclear-encoded large subunit rRNA, suggesting that lamellae are products of convergent evolution. Expand
A sequence database for the identification of ectomycorrhizal basidiomycetes by phylogenetic analysis
TLDR
A sequence database for 80 genera of Basidiomycota from the Hymenomycete lineage for a small region of the mitochondrial large subunit rRNA gene is assembled, and two interesting patterns emerge: the switch between ectomycorrhizae and saprobic lifestyles appears to have happened convergently several and perhaps many times. Expand
Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics
TLDR
A phylogeny of ribosomal DNA sequences coding for the small subunit gene of 54 chytrids, with emphasis on sampling the largest order, the Chytridiales, revealed homoplasy in several developmental and zoosporangial characters and suggested that the divergence times of these groups may be ancient. Expand
Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions
TLDR
Analyses of ribosomal Large Subunit DNA sequences confirmed that Collybia tuberosa, C. cirrhata and C. cookei formed a monophyletic group and a separate genus name, Dendrocollybia, is proposed for this species. Expand
Phylogenetic relationships in the genus Hebeloma based on ITS 1 and 2 sequences with special emphasis on the Hebeloma crustuliniforme complex
TLDR
Phylogenetic relationships within the genus Hebeloma (Cortinariaceae, Agaricales) were de- termined, based on nuclear ribosomal ITS sequenc- es, using cladistic methods, to derive a revised infrageneric classification of He Beloma. Expand
PARTIAL BETA -TUBULIN GENE SEQUENCES FOR EVOLUTIONARY STUDIES IN THE BASIDIOMYCOTINA
TLDR
The existing level of varia- tion among the fungi examined indicates that this gene will be useful in phylogenetic investigations of higher order relationships among broader groups of fungi. Expand
PHYLOGENETIC SYSTEMATICS OF LEPIOTA SENSU LATO BASED ON NUCLEAR LARGE SUBUNIT RDNA EVIDENCE
TLDR
Par- simony analysis indicates that both Agaricus and Co- prinus section Comati are nested within the lepiotoid fungi, which is consistent with the exclusion of the tribe Cystoderma and Ripartitella from the family Agaricaceae, and the retention of the tribes Lepi- oteae and Leucocoprineae. Expand
...
1
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4
5
...