On the origin of European lilies: phylogenetic analysis of Lilium section Liriotypus (Liliaceae) using sequences of the nuclear ribosomal transcribed spacers

@inproceedings{Ikinci2006OnTO,
  title={On the origin of European lilies: phylogenetic analysis of Lilium section Liriotypus (Liliaceae) using sequences of the nuclear ribosomal transcribed spacers},
  author={Nursel Ikinci and Christoph Oberprieler and Adil G{\"u}ner},
  year={2006}
}
Abstract İkinci, N., Oberprieler, C. & Güner, A.: On the origin of European lilies: phylogenetic analysis of Lilium section Liriotypus (Liliaceae) using sequences of the nuclear ribosomal transcribed spacers. — Willdenowia 36: 647–656. — ISSN 0511-9618; © 2006 BGBM Berlin-Dahlem doi:10.3372/wi.36.36201 (available via http://dx.doi.org/) The sequences of the nuclear ribosomal internal transcribed spacer (ITS) region were analysed for 28 representatives of Lilium, one Nomocharis species and three… 
Molecular phylogeny and divergence times estimates of Lilium section Liriotypus (Liliaceae) based on plastid and nuclear ribosomal ITS DNA sequence data
TLDR
The phylogenetic reconstruction based on combined analysis of plastid and nrDNA ITS sequence data shows that all of the analysed species of section Liriotypus form a well-supported monophyletic clade, however, there are some incongruences between the analysis made byplastid DNA alone and with a combined dataset regarding the positions of L. monadelphum.
Major Lineages of the Genus Lilium (Liliaceae) Based on nrDNA ITS Sequences, with Special Emphasis on the Korean Species
TLDR
Most comprehensive phylogenetic analysis of 196 accessions of Lilium representing 83 species and 14 varieties of Lilia and three outgroup genera to investigate infrageneric relationships within Lilium as well as to determine the origin and evolution of Korean species of Lilio.
Frequent gene flow blurred taxonomic boundaries of sections in Lilium L. (Liliaceae)
TLDR
In conclusion, this study not only detected frequent gene flow among Lilium sections that resulted in phylogenetic incongruence but also reconstructed a hypothetical species tree that gave insights into the nature of the complex relationshipsamong Lilium species.
Phylogeny, Age, and Evolution of Tribe Lilieae (Liliaceae) Based on Whole Plastid Genomes
TLDR
The reconstruction of the ancestral area implies that Lilieae may have originated from the Qinghai-Tibet Plateau: the Himalayas and Hengduan Mountains and uplifting of the QTP likely promoted divergence within the tribe, contributing to a better understanding of the evolutionary history of lilies.
Karyotype evolution and speciation of European lilies from Lilium sect. Liriotypus.
TLDR
Clear interspecific differentiation was revealed among karyotypes of these taxa using fluorochrome (chromomycin and DAPI) bandings, fluorescent in situ hybridization and silver staining and it is hypothesized that the type species of Lilium sect.
Familial relationships of the monocot order Liliales based on a molecular phylogenetic analysis using four plastid loci: matK, rbcL, atpB and atpF‐H
TLDR
Phylogenetic relationships among families of Liliales were better defined here than in a previous molecular analysis, although the placement of Corsiaceae with plastid data remains problematic.
Phylogenetics and Biogeography of Lilium ledebourii from the Hyrcanian Forest
TLDR
The north of Iran appears to have promoted both long-term persistence and migration of Lily species from Asia to the Europe, and specific members of Lilium colonized Iran (Western Asia), and then yielded the Iranian L.ledebourri.
Chromosome diversity and evolution in tribe Lilieae (Liliaceae) with emphasis on Chinese species
TLDR
The results showed that, the relationship of genera in Lilieae that inferred from Maximum Parsimony criteria and Bayesian Inference were congruent with previous studies, which focused on higher level of Liliales.
A new species in the genus Nomocharis Franchet (Liliaceae): evidence that brings the genus Nomocharis into Lilium
TLDR
The phylogenetic and pair-wise distance analyses of nrITS and chloroplast psbA-trnH support recognition of the yellow-flowered morphotype lacking nectary processes as a new, separate species of Nomocharis, and support the monophyly of Lilium–Nomocharis and mutual paraphyly of the two genera.
New Insights on Lilium Phylogeny Based on a Comparative Phylogenomic Study Using Complete Plastome Sequences
TLDR
The species tree for the genus Lilium was constructed using 28 Lilium species plastomes and Comber’s classification was verified, revealing that the ancestor Martagon diverged from Sinomartagon species and that Pseudolirium and Leucolirion are polyphyletic.
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The phylogeny derived from ITS sequences estimated using maximum-likelihood methods indicated that most of the species construct their own clade according to the classification based on morphological features at the section level.
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Phylogenetic analyses based on the majority rule of the sequence data of matK gene revealed that the genus Lilium consists of three different major clades, including taxa that were placed into different sections by earlier taxonomic treatments, and thus the results of molecular systematic analysis was not congruent with sectional delimitations of the genus liliumbased on the morphological characters.
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TLDR
The core Liliales provide compelling examples of both concerted convergence and phy‐logenetic niche conservatism in the context‐specific adaptive value of each of these traits, as well as evidence of parallel trends in other groups.
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TLDR
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    Theoretical and Applied Genetics
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TLDR
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