Non contiguous-finished genome sequence and description of Bacillus timonensis sp. nov.

@article{Kokcha2012NonCG,
  title={Non contiguous-finished genome sequence and description of Bacillus timonensis sp. nov.},
  author={Sahare Kokcha and Ajay Kumar Mishra and Jean-Christophe Lagier and Matthieu Million and Quentin Leroy and Didier Raoult and Pierre-Edouard Fournier},
  journal={Standards in Genomic Sciences},
  year={2012},
  volume={6},
  pages={346 - 355}
}
Bacillus timonensis strain MM10403188T sp. nov. is the type strain of a proposed new species within the genus Bacillus. This strain, whose genome is described here, was isolated from the fecal flora of a healthy patient. B. timonensis is an aerobic Gram-negative rod shaped bacterium. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,632,049 bp long genome (1 chromosome but no plasmid) contains 4,610 protein-coding and 74 RNA genes… Expand
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References

SHOWING 1-10 OF 38 REFERENCES
Non-contiguous finished genome sequence and description of Anaerococcus senegalensis sp. nov.
TLDR
The features of this organism are described together with the complete genome sequence and annotation and the strain whose genome is described here was isolated from the fecal flora of a healthy patient. Expand
Non-contiguous finished genome sequence and description of Clostridium senegalense sp. nov.
TLDR
The features of this organism are described, together with the complete genome sequence and annotation, and this strain, which was isolated from the fecal flora of a healthy patient, is an obligate anaerobic Gram-positive rod-shaped bacterium. Expand
Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
TLDR
This strain, whose genome is described here, was isolated from the fecal flora of a 4-month-old Senegalese child suffering from gastroenteritis and contains 3,843 protein-coding and 73 RNA genes, including 8 rRNA genes. Expand
Bacillus arenosi sp. nov., Bacillus arvi sp. nov. and Bacillus humi sp. nov., isolated from soil.
TLDR
The three groups of isolates isolated from soil of the Drentse A agricultural research area in The Netherlands represent novel species, for which the names Bacillus humi, Bacillus arenosi and Bacillus arvi are proposed, with LMG 22167T (=DSM 16318T) and L MG 22165T (= DSM 16317T) as the respective type strains. Expand
Bacillus cereus, a Volatile Human Pathogen
  • E. Bottone
  • Medicine, Biology
  • Clinical Microbiology Reviews
  • 2010
TLDR
Outside its notoriety in association with food poisoning and severe eye infections, this bacterium has been incriminated in a multitude of other clinical conditions such as anthrax-like progressive pneumonia, fulminant sepsis, and devastating central nervous system infections, particularly in immunosuppressed individuals, intravenous drug abusers, and neonates. Expand
Proposals Concerning the Higher Taxa of Bacteria
TLDR
Names are proposed for divisions, classes, and some orders of bacteria that include organisms having a rigid cell wall but do not contain peptidoglycan. Expand
Notes on the characterization of prokaryote strains for taxonomic purposes.
TLDR
The purpose of the present article is to outline the key elements in the way that prokaryotes are characterized, with a view to providing an overview of some of the pitfalls commonly encountered in taxonomic papers. Expand
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.
TLDR
It is proposed that a formal system of organisms be established in which above the level of kingdom there exists a new taxon called a "domain." Life on this planet would be seen as comprising three domains, the Bacteria, the Archaea, and the Eucarya, each containing two or more kingdoms. Expand
DNA-DNA Reassociation Methods Applied to Microbial Taxonomy and Their Critical Evaluation
TLDR
It is still too soon to substitute DNA-DNA reassociation techniques for circumscribe species because of several reasons: (a) the use of whole genome hybridizations in the definition of species has been of paramount influence and has actually determined the size and shape of what the authors call ‘species’, (b) there are almost 5,000 species described, many of them based on reassociation experiments, and the legitimacy of new circumscription methods should be validated. Expand
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
TLDR
Results from running RNAmmer on a large set of genomes indicate that the location of rRNAs can be predicted with a very high level of accuracy. Expand
...
1
2
3
4
...