NGS-Trex: Next Generation Sequencing Transcriptome profile explorer

@article{Boria2013NGSTrexNG,
  title={NGS-Trex: Next Generation Sequencing Transcriptome profile explorer},
  author={Ilenia Boria and L. Boatti and G. Pesole and F. Mignone},
  journal={BMC Bioinformatics},
  year={2013},
  volume={14},
  pages={S10 - S10}
}
BackgroundNext-Generation Sequencing (NGS) technology has exceptionally increased the ability to sequence DNA in a massively parallel and cost-effective manner. Nevertheless, NGS data analysis requires bioinformatics skills and computational resources well beyond the possibilities of many "wet biology" laboratories. Moreover, most of projects only require few sequencing cycles and standard tools or workflows to carry out suitable analyses for the identification and annotation of genes… Expand
NGS-Trex: an automatic analysis workflow for RNA-Seq data.
RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application
T-REx: Transcriptome analysis webserver for RNA-seq Expression data
NexGenEx-Tom: a gene expression platform to investigate the functionalities of the tomato genome
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