Corpus ID: 6789996

NCBO Annotator : Semantic Annotation of Biomedical Data

@inproceedings{Jonquet2009NCBOA,
  title={NCBO Annotator : Semantic Annotation of Biomedical Data},
  author={C. Jonquet and N. Shah and Cherie Youn and M. Musen and Chris Callendar and Margaret-Anne Storey},
  year={2009}
}
  • C. Jonquet, N. Shah, +3 authors Margaret-Anne Storey
  • Published 2009
  • The National Center for Biomedical Ontology Annotator is an ontology-based web service for annotation of textual biomedical data with biomedical ontology concepts. The biomedical community can use the Annotator service to tag datasets automatically with concepts from more than 200 ontologies coming from the two most important set of biomedical ontology & terminology repositories: the UMLS Metathesaurus and NCBO BioPortal. Through annotation (or tagging) of datasets with ontology concepts… CONTINUE READING
    53 Citations

    Figures from this paper.

    Comparison of Natural Language Processing Tools for Automatic Gene Ontology Annotation of Scientific Literature
    • 4
    • PDF
    CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata
    • 5
    • PDF
    BIOTEX: A system for Biomedical Terminology Extraction, Ranking, and Validation
    • 32
    • PDF
    Aligning Biomedical Metadata with Ontologies Using Clustering and Embeddings
    • 4
    • PDF
    Semantic biomedical resource discovery: a Natural Language Processing framework
    • 21
    • PDF
    Ontology Mapping for Life Science Linked Data
    • 2
    • PDF

    References

    SHOWING 1-6 OF 6 REFERENCES
    The Open Biomedical Annotator
    • 265
    • PDF
    Ontology-driven indexing of public datasets for translational bioinformatics
    • 113
    • PDF
    Semantic annotation for knowledge management: Requirements and a survey of the state of the art
    • 608
    • PDF
    Annotation for the semantic web
    • 116
    An Efficient Solution for Mapping Free Text to Ontology Terms
    • AMIA Summit on Translational Bioinformatics,
    • 2008