Molecular mechanism of 15-lipoxygenase allosteric activation and inhibition.
@article{Meng2018MolecularMO,
title={Molecular mechanism of 15-lipoxygenase allosteric activation and inhibition.},
author={Hu Meng and Ziwei Dai and Weilin Zhang and Ying Liu and Luhua Lai},
journal={Physical chemistry chemical physics : PCCP},
year={2018},
volume={20 21},
pages={
14785-14795
}
}Human reticulocyte 15-lipoxygenase (15-LOX) plays an important role in inflammation resolution and is also involved in many cancer-related processes. Both an activator and an inhibitor will serve as research tools for understanding the biological functions of 15-LOX and provide opportunities for drug discovery. In a previous study, both allosteric activators and inhibitors of 15-LOX were discovered through a virtual screening based computational approach. However, why molecules binding to the…
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References
SHOWING 1-10 OF 32 REFERENCES
Discovery of Novel 15-Lipoxygenase Activators To Shift the Human Arachidonic Acid Metabolic Network toward Inflammation Resolution.
- BiologyJournal of medicinal chemistry
- 2016
A computational approach to discover a previously unknown allosteric site on 15-LOX demonstrated the promising therapeutic value of enzyme activators and aid in further development of activators of other proteins.
Do human lipoxygenases have a PDZ regulatory domain?
- BiologyCurrent molecular medicine
- 2008
The hypothesis that lipoxygenases may possess about approximately 110 amino acids PDZ-like fragments of functional importance is proposed, which might help to explain their association with other molecules, role in signaling pathways and present a new avenue to explore the regulation of their behavior, and thus intervention in the course of diseases.
Inhibition studies of soybean and human 15-lipoxygenases with long-chain alkenyl sulfate substrates.
- BiologyBiochemistry
- 2001
Results demonstrate that SLO catalyzes all three fatty sulfate substrates and is not inhibited, indicating a binding selectivity of LS for the catalytic site and OS for the allosteric site, and indicates that the inhibition of 15-HLO is due to a substrate aggregate.
Ligand‐induced formation of transient dimers of mammalian 12/15‐lipoxygenase: A key to allosteric behavior of this class of enzymes?
- BiologyProteins
- 2012
These data provide direct structural evidence for the existence of LOX dimers, where two noncovalently linked enzyme molecules might work in unison and, therefore, such mode of association might be related to the allosteric character of 12/15‐LOX.
Two pathways mediate interdomain allosteric regulation in pin1.
- Biology, ChemistryStructure
- 2015
Suicidal inactivation of the rabbit 15-lipoxygenase by 15S-HpETE is paralleled by covalent modification of active site peptides.
- BiologyFree radical biology & medicine
- 2003
Arachidonate and Related Unsaturated Fatty Acids Selectively Inactivate the Guanine Nucleotide-binding Regulatory Protein, G(*)
- Biology, ChemistryThe Journal of Biological Chemistry
- 1996
The ability of arachidonate to inactivate this adenylyl cyclase-inhibitory G protein provides a molecular mechanism for previous findings that treatment of platelets with arachide results in elevated cAMP levels and similar effects of unsaturated fatty acids on other proteins involved in cell signaling indicate potential roles for these lipids in signal modulation.
Isotope sensitive branching and kinetic isotope effects in the reaction of deuterated arachidonic acids with human 12- and 15-lipoxygenases.
- Chemistry, BiologyBiochemistry
- 2008
Investigation into the origins for the smaller KIEs led to the discovery of isotope sensitive branching of the reaction pathways, and an inversion in the regioselectivity of 15-hLO-1 was demonstrated.
15-Lipoxygenases in cancer: a double-edged sword?
- Biology, MedicineProstaglandins & other lipid mediators
- 2013