Molecular characterization and population structure of blackberry vein banding associated virus, new Ampelovirus associated with yellow vein disease.

@article{ThekkeVeetil2013MolecularCA,
  title={Molecular characterization and population structure of blackberry vein banding associated virus, new Ampelovirus associated with yellow vein disease.},
  author={Thanuja Thekke-Veetil and Nina Aboughanem-Sabanadzovic and Karen E. Keller and Robert R Martin and Sead Sabanadzovic and Ioannis E. Tzanetakis},
  journal={Virus research},
  year={2013},
  volume={178 2},
  pages={
          234-40
        }
}
Intra-species recombination among strains of the ampelovirus Grapevine leafroll-associated virus 4
TLDR
Genome-wide analyses showed for the first time that recombinantion can occur between distinct strains of GLRaV-4 resulting in the emergence of genetically stable and biologically successful chimeric viruses.
An Analysis of the Complete Genome Sequence and Subgenomic RNAs Reveals Unique Features of the Ampelovirus, Grapevine leafroll-associated virus 1.
TLDR
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Genomic Characterization and Population Structure of a Badnavirus Infecting Blackberry.
TLDR
A new double-stranded DNA virus, referred to as blackberry virus F (BVF), a putative member of the genus Badnavirus, family Caulimoviridae, was identified and affects the production of virus-free propagation material, the cornerstone for certification programs.
Blackberry Virosome : A Micro and Macro Approach
TLDR
The objective of this research was to study the blackberry virosome in both the macro and micro scale to better understand virus distribution in nature and aid in the development of proper management strategies to control epidemics.
A novel ampelovirus associated with mealybug wilt of pineapple (Ananas comosus).
TLDR
The present study reports the discovery of PMWaV-6, a putative and distinct new member of the genus Ampelovirus, subgroup I, its potential involvement in MWP, and the development of PM WaV- 6-specific RT-PCR assays to detect and monitor this virus in field samples.
Pest categorisation of non‐EU viruses of Rubus L.
TLDR
A pest categorisation of 17 viruses of Rubus L. that were previously classified as either non‐EU or of undetermined standing in a previous opinion found that they do not meet the criteria to qualify as potential Union regulated non‐quarantine pests.
A new, widespread emaravirus discovered in blackberry.
TLDR
The genome of the new virus, provisionally named blackberry leaf mottle-associated virus (BLMaV), was characterized and phylogenetic analysis revealed its close relationship to recognized members of the genus Emaravirus.
Viral suppressors from members of the family
RNA silencing is an evolutionarily homology-based gene inactivation mechanism and plays critical roles in plant immune responses to acute or chronic virus infections, which often pose serious threats
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The genetic landscape of GLRaV-1 populations presented in this study provides a foundation for better understanding of the epidemiology of grapevine leafroll disease across grape-growing regions in the United States.
Genetic variability and population structure of Grapevine leafroll-associated virus 3 isolates.
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Estimation of genetic diversity and phylogenetic analysis disclosed the possible existence of vines with mixed infections by diverging sequence variants, showing, in some cases, possible recombination events.
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Natural spread of grapevine leafroll disease was observed in a Pinot Noir clonal evaluation trial in South Australia and linked GLRaV-3 with the disease spread and detected the infection prior to the onset of symptoms.
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Grapevine leafroll-associated virus 2 has morphological, physicochemical, ultrastructural, and molecular properties that qualify it as a species in the genus Closterovirus.
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Complete nucleotide sequence of a South African isolate of grapevine leafroll-associated virus 3 reveals a 5′UTR of 737 nucleotides
TLDR
The sequence of GLRaV-3, isolate GP18, has a 50UTR of 737 nt and the 30-terminus of GP18 was found to be similar to that of the NY-1 isolate, and the efficacy of RLM-RACE to determine the 50-termini of multiple ssRNA viruses from total RNA in a single reaction was investigated.
Complete nucleotide sequence and genome organization of Grapevine leafroll-associated virus 3, type member of the genus Ampelovirus.
TLDR
Phylogenetic analysis using MT domains further supports the creation of the genus Ampelovirus for mealy-bug-transmitted viruses in the family Closteroviridae.
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