MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

@inproceedings{Davis2007MolProbityAC,
  title={MolProbity: all-atom contacts and structure validation for proteins and nucleic acids},
  author={Ian W. Davis and Andrew Leaver-Fay and Vincent B. Chen and Jeremy N. Block and Gary J. Kapral and Xueyi Wang and Laura Weston Murray and W. Bryan Arendall and Jack Snoeyink and Jane S. Richardson and David C. Richardson},
  booktitle={Nucleic Acids Research},
  year={2007}
}
MolProbity is a general-purpose web server offering quality validation for 3D structures of proteins, nucleic acids and complexes. It provides detailed all-atom contact analysis of any steric problems within the molecules as well as updated dihedral-angle diagnostics, and it can calculate and display the H-bond and van der Waals contacts in the interfaces between components. An integral step in the process is the addition and full optimization of all hydrogen atoms, both polar and nonpolar. New… CONTINUE READING

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