Modeling neutral viral mutations in the spread of SARS-CoV-2 epidemics

@article{Marquioni2021ModelingNV,
  title={Modeling neutral viral mutations in the spread of SARS-CoV-2 epidemics},
  author={Vitor M Marquioni and M. D. de Aguiar},
  journal={PLoS ONE},
  year={2021},
  volume={16}
}
Although traditional models of epidemic spreading focus on the number of infected, susceptible and recovered individuals, a lot of attention has been devoted to integrate epidemic models with population genetics. Here we develop an individual-based model for epidemic spreading on networks in which viruses are explicitly represented by finite chains of nucleotides that can mutate inside the host. Under the hypothesis of neutral evolution we compute analytically the average pairwise genetic… Expand

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