MemBrain: An Easy-to-Use Online Webserver for Transmembrane Protein Structure Prediction

@article{Yin2018MemBrainAE,
  title={MemBrain: An Easy-to-Use Online Webserver for Transmembrane Protein Structure Prediction},
  author={Xiao-lin Yin and Jing Yang and Feng Xiao and Y. Yang and Hong-Bin Shen},
  journal={Nano-Micro Letters},
  year={2018},
  volume={10}
}
AbstractMembrane proteins are an important kind of proteins embedded in the membranes of cells and play crucial roles in living organisms, such as ion channels, transporters, receptors. Because it is difficult to determinate the membrane protein’s structure by wet-lab experiments, accurate and fast amino acid sequence-based computational methods are highly desired. In this paper, we report an online prediction tool called MemBrain, whose input is the amino acid sequence. MemBrain consists of… Expand
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References

SHOWING 1-10 OF 32 REFERENCES
Enhancing the Prediction of Transmembrane β-Barrel Segments with Chain Learning and Feature Sparse Representation
MemBrain: Improving the Accuracy of Predicting Transmembrane Helices
Fuzzy KNN for predicting membrane protein types from pseudo-amino acid composition.
MemType-2L: a web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM.
  • K. Chou, Hong-Bin Shen
  • Computer Science, Medicine
  • Biochemical and biophysical research communications
  • 2007
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Deep architectures for protein contact map prediction
...
1
2
3
4
...