Mapping and quantifying mammalian transcriptomes by RNA-Seq

@article{Mortazavi2008MappingAQ,
  title={Mapping and quantifying mammalian transcriptomes by RNA-Seq},
  author={Ali Mortazavi and Brian A. Williams and K. Mccue and L. Schaeffer and B. Wold},
  journal={Nature Methods},
  year={2008},
  volume={5},
  pages={621-628}
}
  • Ali Mortazavi, Brian A. Williams, +2 authors B. Wold
  • Published 2008
  • Biology, Medicine
  • Nature Methods
  • We have mapped and quantified mouse transcriptomes by deeply sequencing them and recording how frequently each gene is represented in the sequence sample (RNA-Seq). This provides a digital measure of the presence and prevalence of transcripts from known and previously unknown genes. We report reference measurements composed of 41–52 million mapped 25-base-pair reads for poly(A)-selected RNA from adult mouse brain, liver and skeletal muscle tissues. We used RNA standards to quantify transcript… CONTINUE READING

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    References

    Publications referenced by this paper.
    SHOWING 1-10 OF 24 REFERENCES