Maintaining the integrity of human immunodeficiency virus sequence databases.

@article{Learn1996MaintainingTI,
  title={Maintaining the integrity of human immunodeficiency virus sequence databases.},
  author={Gerald H. Learn and Bette T Korber and Brad Foley and Beatrice H. Hahn and Steven M. Wolinsky and James I. Mullins},
  journal={Journal of virology},
  year={1996},
  volume={70 8},
  pages={5720-30}
}
Human immunodeficiency virus type 1 (HIV-1) sequences are accumulating in the literature at a rapid pace. For this ever-expanding resource to be maximally useful, it is critical that researchers strive to maintain a high level of quality assurance, both in experimental design and conduct and in analyses. Here we present detailed analyses of problematic sets of HIV-1 sequences in the database that include sequence anomalies suggestive of mislabeling or sample contamination problems. These data… CONTINUE READING

Citations

Publications citing this paper.
Showing 1-10 of 46 extracted citations

References

Publications referenced by this paper.
Showing 1-10 of 47 references

PHYLIP (Phylogeny Inference Package), version 3.5c

  • J. Felsenstein
  • 1993
Highly Influential
6 Excerpts

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

  • M. Kimura
  • J. Mol. Evol
  • 1980
Highly Influential
5 Excerpts

PAUP 3.1.1: Phylogenetic Analysis Using Parsimony, version 3.1.1

  • D. L. Swofford
  • Illinois Natural History Survey,
  • 1993
Highly Influential
3 Excerpts

MacClade, version 3.01

  • W. P. Maddison, D. R. Maddison
  • Sinauer and Associates,
  • 1992
Highly Influential
2 Excerpts

Similar Papers

Loading similar papers…