MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements

@inproceedings{Yang2013MITEDA,
  title={MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements},
  author={Guojun Yang},
  booktitle={BMC Bioinformatics},
  year={2013}
}
Miniature inverted repeat transposable elements (MITEs) are abundant non-autonomous elements, playing important roles in shaping gene and genome evolution. Their characteristic structural features are suitable for automated identification by computational approaches, however, de novo MITE discovery at genomic levels is still resource expensive. Efficient and accurate computational tools are desirable. Existing algorithms process every member of a MITE family, therefore a major portion of the… CONTINUE READING
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