MINER: software for phylogenetic motif identification

@article{La2005MINERSF,
  title={MINER: software for phylogenetic motif identification},
  author={David La and Dennis R. Livesay},
  journal={Nucleic Acids Research},
  year={2005},
  volume={33},
  pages={W267 - W270}
}
MINER is web-based software for phylogenetic motif (PM) identification. PMs are sequence regions (fragments) that conserve the overall familial phylogeny. PMs have been shown to correspond to a wide variety of catalytic regions, substrate-binding sites and protein interfaces, making them ideal functional site predictions. The MINER output provides an intuitive interface for interactive PM sequence analysis and structural visualization. The web implementation of MINER is freely available at http… CONTINUE READING

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