MEME Suite: tools for motif discovery and searching

@inproceedings{Bailey2009MEMEST,
  title={MEME Suite: tools for motif discovery and searching},
  author={Timothy L. Bailey and Mikael Bod{\'e}n and Fabian A. Buske and Martin C. Frith and Charles E. Grant and Luca Clementi and Jingyuan Ren and Wilfred W. Li and William Stafford Noble},
  booktitle={Nucleic Acids Research},
  year={2009}
}
The MEME Suite web server provides a unified portal for online discovery and analysis of sequence motifs representing features such as DNA binding sites and protein interaction domains. The popular MEME motif discovery algorithm is now complemented by the GLAM2 algorithm which allows discovery of motifs containing gaps. Three sequence scanning algorithms… CONTINUE READING