Lumpability abstractions of rule-based systems

@article{Feret2012LumpabilityAO,
  title={Lumpability abstractions of rule-based systems},
  author={J{\'e}r{\^o}me Feret and Thomas A. Henzinger and Heinz Koeppl and Tatjana Petrov},
  journal={Theor. Comput. Sci.},
  year={2012},
  volume={431},
  pages={137-164}
}
The induction of a signaling pathway is characterized by transient complex formation and mutual posttranslational modification of proteins. To faithfully capture this combinatorial process in a mathematical model is an important challenge in systems biology. Exploiting the limited context on which most binding and modification events are conditioned, attempts have been made to reduce the combinatorial complexity by quotienting the reachable set of molecular species into species aggregates while… 

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