LogoBar: bar graph visualization of protein logos with gaps

Abstract

SUMMARY LogoBar is a Java application to display protein sequence logos. In our software gaps are accounted for when calculating the information content present at each residue position in a multiple alignment. The resulting logo is displayed as a graph consisting of bars, although traditional letter representation is also possible. Amino acids are… (More)
DOI: 10.1093/bioinformatics/bti761

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