Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice

@article{Rakshit2006LargescaleDP,
  title={Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice},
  author={Sujay Rakshit and Arunita Rakshit and Hideo Matsumura and Yoshihiro Takahashi and Yoshitaka Hasegawa and Akiko Ito and Takashige Ishii and Naohiko T. Miyashita and Ryohei Terauchi},
  journal={Theoretical and Applied Genetics},
  year={2006},
  volume={114},
  pages={731-743}
}
Polymorphism over ∼26 kb of DNA sequence spanning 22 loci and one region distributed on chromosomes 1, 2, 3 and 4 was studied in 30 accessions of cultivated rice, Oryza sativa, and its wild relatives. Phylogenetic analysis using all the DNA sequences suggested that O. sativa ssp. indica and ssp. japonica were independently domesticated from a wild species O. rufipogon. O. sativa ssp. indica contained substantial genetic diversity (π = 0.0024), whereas ssp. japonica exhibited extremely low… CONTINUE READING
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