KnotInFrame: prediction of −1 ribosomal frameshift events


Programmed -1 ribosomal frameshift (-1 PRF) allows for alternative reading frames within one mRNA. First found in several viruses, it is now believed to exist in all kingdoms of life. Strong stimulators for -1 PRF are a heptameric slippery site and an RNA pseudoknot. Here, we present a new algorithm KnotInFrame, for the automatic detection of -1 PRF signals… (More)
DOI: 10.1093/nar/gkn578


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@inproceedings{Theis2008KnotInFramePO, title={KnotInFrame: prediction of −1 ribosomal frameshift events}, author={Corinna Theis and Jens Reeder and Robert Giegerich}, booktitle={Nucleic acids research}, year={2008} }