Jaguc - a Software package for Environmental Diversity Analyses

@article{Nebel2011JagucA,
  title={Jaguc - a Software package for Environmental Diversity Analyses},
  author={Markus E. Nebel and Sebastian Wild and Michael Holzhauser and Lars H{\"u}ttenberger and Raphael Reitzig and Matthias Sperber and Thorsten Stoeck},
  journal={Journal of bioinformatics and computational biology},
  year={2011},
  volume={9 6},
  pages={
          749-73
        }
}
BACKGROUND The study of microbial diversity and community structures heavily relies on the analyses of sequence data, predominantly taxonomic marker genes like the small subunit of the ribosomal RNA (SSU rRNA) amplified from environmental samples. Until recently, the "gold standard" for this strategy was the cloning and Sanger sequencing of amplified target genes, usually restricted to a few hundred sequences per sample due to relatively high costs and labor intensity. The recent introduction… CONTINUE READING
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